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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908629.1_cds_XP_016458782.1_52378
CDS Infomation

[gene=LOC107782411] [db_xref=GeneID:107782411] [protein=shikimate O-hydroxycinnamoyltransferase-like] [protein_id=XP_016458782.1] [location=complement(join(75654..76298,77471..77944))] [gbkey=CDS]
Sequence

ATGGCAACTTGCAATGGAAATGGAGCTGCAGAATTTTCCTCCAAATTGCAAGTTGAAGCA
ATCCAAACTGTGATACCAATGAAGATAACCGATCCACGGTTATCAAGGCGAATCGCGGTA
TCTGAAAATTTTTGCTCGGGCGATTTGCAAAGGCGATTTCACATGGTGTTGTACTATAAC
AAAGCATCAGAGGCGGATTCAGGATGGATAATTGCGGGTTGGTTTAAAGAGTCACTAGGA
ATGGCAATAGTTGAAAGTCCATTATTTGGTGGAAGACTAAGGAAATTAGAGGATAATAAT
GATTTGGAGTTGGTTTCAAATGATTCTGGTGTTAGATTGGTTGAGGCTAATGCTCAAATA
AATATGGCTGATTTTATTGATCTCAAAAACAAGGAAAATGTAGAAACTGAGCTTGTCTTT
TGGGAAGATATTCATGAAACAAATCCTCAGTTTTCTCCCCTTTTCTATGTCCAGGTGACA
AATTTCAAGTGTGGAGGATATTCAATTGGGATAAGTTGCAGCCTTTTTCTAGCAGATCCT
TTTGTCATGACAAGTTTCTTGAAAAATTGGTCCCAAATTCACAACAATTTGATCTCACAA
ATTGATGCACCAAAAATTCCAGCATTTTACACTCCAAATCTAAGAAAAGTTGGCTTTTTA
CCAACTATATCAAGTAGCTTAACCACAAGAAATCAAACCACTCAAACTCTAATTTTCAAG
ATTCCCAAAAATCTCTTGAAAATTAATGATAAATTCCTCAAAAATCTTGCATCAAAATGT
GTTGGAGAAACAGAGGGAAAACTTGGTAAACAATTGTCTTCAAAATTCACTTTGTTTGTG
AAAGAGAGTACTAACTCTGAGAATGTTATTAGGGTGGAAACTTGTATTAGAGAGGAGATA
ATTAAGGAAGAATGTGAATTAATAGCTAAAAGTGGTGGATTAATTTCAGCAAGTTGGGAT
GATTTGGAAGGTGATAAAGTGAGTTTTAATGAAGGAAATAAGGCTGTTAATATTTCATGT
TGGATTATTAATGTAGAAAATCAAGATCTTGTGATGATTACTCCATCTCCTGATGAAGAC
GGCTCTCAACTAAACATTATAATTACAGTTACTAATTAG

Peptide Sequence

PEP ID

XP_016458782.1
PEP Infomation

PREDICTED: shikimate O-hydroxycinnamoyltransferase-like [Nicotiana tabacum]
Sequence

MATCNGNGAAEFSSKLQVEAIQTVIPMKITDPRLSRRIAVSENFCSGDLQRRFHMVLYYN
KASEADSGWIIAGWFKESLGMAIVESPLFGGRLRKLEDNNDLELVSNDSGVRLVEANAQI
NMADFIDLKNKENVETELVFWEDIHETNPQFSPLFYVQVTNFKCGGYSIGISCSLFLADP
FVMTSFLKNWSQIHNNLISQIDAPKIPAFYTPNLRKVGFLPTISSSLTTRNQTTQTLIFK
IPKNLLKINDKFLKNLASKCVGETEGKLGKQLSSKFTLFVKESTNSENVIRVETCIREEI
IKEECELIAKSGGLISASWDDLEGDKVSFNEGNKAVNISCWIINVENQDLVMITPSPDED
GSQLNIIITVTN

Transcript Sequence

Gene sequence data has not been registered.